node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ01014.1 | rnj | AA314_02640 | AA314_02941 | Lysine decarboxylase family. | Ribonuclease J2; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.577 |
AKJ01289.1 | rnj | AA314_02915 | AA314_02941 | Cell division protein FtsK. | Ribonuclease J2; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.563 |
AKJ01289.1 | topA | AA314_02915 | AA314_06665 | Cell division protein FtsK. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.531 |
AKJ01313.1 | AKJ01314.1 | AA314_02939 | AA314_02940 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0234 family. | 0.773 |
AKJ01313.1 | rimO | AA314_02939 | AA314_02938 | Hypothetical protein. | tRNA-i(6)A37 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.773 |
AKJ01313.1 | rnj | AA314_02939 | AA314_02941 | Hypothetical protein. | Ribonuclease J2; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.732 |
AKJ01314.1 | AKJ01313.1 | AA314_02940 | AA314_02939 | Hypothetical protein; Belongs to the UPF0234 family. | Hypothetical protein. | 0.773 |
AKJ01314.1 | rimO | AA314_02940 | AA314_02938 | Hypothetical protein; Belongs to the UPF0234 family. | tRNA-i(6)A37 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.801 |
AKJ01314.1 | rnj | AA314_02940 | AA314_02941 | Hypothetical protein; Belongs to the UPF0234 family. | Ribonuclease J2; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.778 |
dapA | rnj | AA314_08593 | AA314_02941 | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | Ribonuclease J2; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.786 |
hpf | rnj | AA314_02240 | AA314_02941 | Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | Ribonuclease J2; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.597 |
hpf | rpsK | AA314_02240 | AA314_04755 | Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | SSU ribosomal protein S11p; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.714 |
hpf | topA | AA314_02240 | AA314_06665 | Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.493 |
rimO | AKJ01313.1 | AA314_02938 | AA314_02939 | tRNA-i(6)A37 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | Hypothetical protein. | 0.773 |
rimO | AKJ01314.1 | AA314_02938 | AA314_02940 | tRNA-i(6)A37 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | Hypothetical protein; Belongs to the UPF0234 family. | 0.801 |
rimO | rnj | AA314_02938 | AA314_02941 | tRNA-i(6)A37 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | Ribonuclease J2; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.790 |
rimO | rpsK | AA314_02938 | AA314_04755 | tRNA-i(6)A37 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | SSU ribosomal protein S11p; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.404 |
rnj | AKJ01014.1 | AA314_02941 | AA314_02640 | Ribonuclease J2; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | Lysine decarboxylase family. | 0.577 |
rnj | AKJ01289.1 | AA314_02941 | AA314_02915 | Ribonuclease J2; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | Cell division protein FtsK. | 0.563 |
rnj | AKJ01313.1 | AA314_02941 | AA314_02939 | Ribonuclease J2; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | Hypothetical protein. | 0.732 |