STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01356.1Hypothetical protein. (739 aa)    
Predicted Functional Partners:
AKJ05391.1
Internalin, putative.
  
     0.694
AKI99700.1
Hypothetical protein.
  
     0.557
AKJ02510.1
Oligo alginate lyase.
  
     0.539
AKJ00464.1
Tat.
  
     0.538
AKJ02076.1
Putative immunogloblin.
  
     0.530
AKJ00779.1
Cell division protein FtsK.
  
     0.526
AKJ01887.1
Beta-lactamase domain protein.
  
     0.510
AKJ01355.1
Hypothetical protein.
       0.503
AKJ03569.1
Phage tail fiber protein.
  
     0.495
AKJ05900.1
Hypothetical protein.
  
     0.495
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.