STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01366.1Integrase. (333 aa)    
Predicted Functional Partners:
AKJ01365.1
Glutathione synthase.
 
    
0.749
AKJ01364.1
Hypothetical protein.
       0.594
AKJ05793.1
Hypothetical protein.
  
     0.573
AKJ02525.1
Hypothetical protein.
  
     0.536
AKJ01367.1
Hypothetical protein.
       0.535
AKJ04431.1
Hypothetical protein.
  
     0.523
AKJ05111.1
WD40 repeat protein.
  
     0.500
AKJ02027.1
Hypothetical protein.
  
     0.476
AKJ05792.1
Hypothetical protein.
  
     0.474
AKJ01683.1
Hypothetical protein.
  
     0.425
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.