STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01370.1Hypothetical protein. (317 aa)    
Predicted Functional Partners:
AKJ01371.1
Histone protein.
       0.548
AKJ01369.1
Hypothetical protein.
       0.529
AKJ01368.1
Sulfur carrier protein adenylyltransferase ThiF.
       0.519
AKI98549.1
Hypothetical protein; Belongs to the UPF0312 family.
  
     0.517
AKJ01390.1
Hypothetical protein.
  
     0.485
AKJ01681.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
    0.470
AKJ05973.1
Isoflavone reductase.
  
     0.429
AKJ01431.1
Hypothetical protein.
  
     0.417
AKJ08366.1
Putative secreted protein.
  
     0.416
AKJ05279.1
Hypothetical protein.
  
     0.415
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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