STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01414.1IroE protein. (271 aa)    
Predicted Functional Partners:
AKJ02786.1
Isochorismatase.
 
  
 0.888
AKJ01413.1
Hypothetical protein.
       0.762
AKI99892.1
Putative esterase.
  
     0.741
AKJ02785.1
2,3-dihydroxybenzoate-AMP ligase.
 
    0.671
AKJ06584.1
Non-ribosomal peptide synthetase.
 
    0.613
AKJ02424.1
Malonyl CoA-acyl carrier protein transacylase.
 
    0.609
AKJ02809.1
Malonyl CoA-acyl carrier protein transacylase.
 
    0.606
AKJ02806.1
Malonyl CoA-acyl carrier protein transacylase.
 
    0.605
AKJ01545.1
Malonyl CoA-acyl carrier protein transacylase.
 
    0.592
AKJ04229.1
Malonyl CoA-acyl carrier protein transacylase.
 
    0.586
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.