STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01418.1Outer membrane protein YfgL, lipoprotein component of the protein assembly complex. (341 aa)    
Predicted Functional Partners:
bamD
Competence protein ComL precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
 
 0.798
bamA
Outer membrane protein assembly factor YaeT precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.706
AKJ06640.1
Outer membrane protein assembly factor YaeT precursor.
  
 
 0.706
AKJ01419.1
Adenosine deaminase.
       0.546
AKJ01420.1
3-oxoacyl-[acyl-carrier protein] reductase.
       0.519
AKI99792.1
Survival protein SurA precursor.
   
 
 0.500
AKI99793.1
Peptidyl-prolyl cis-trans isomerase PpiD.
   
 
 0.500
hisS
Histidyl-tRNA synthetase.
  
    0.479
AKJ00009.1
Hypothetical protein.
   
 
 0.466
AKJ05597.1
Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage.
   
  
 0.463
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.