STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01429.1Transcriptional regulator. (537 aa)    
Predicted Functional Partners:
AKJ01428.1
Long-chain-fatty-acid CoA ligase.
 
     0.932
AKJ01430.1
Phosphoserine phosphatase.
 
     0.903
AKJ04371.1
GMP synthase.
 
  
 0.843
AKJ07783.1
Circadian phase modifier.
 
  
 0.836
AKJ01427.1
Dihydroflavonol-4-reductase.
 
     0.786
AKJ07782.1
Hypothetical protein; Belongs to the LarC family.
 
  
 0.707
AKJ01710.1
Hypothetical protein.
  
     0.644
AKJ04420.1
Hypothetical protein.
  
     0.598
AKJ07688.1
Hypothetical protein.
  
     0.573
AKJ05027.1
Translation initiation factor 2.
  
     0.539
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.