STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01431.1Hypothetical protein. (299 aa)    
Predicted Functional Partners:
AKJ01432.1
UDP-glucose 4-epimerase.
  
    0.595
AKJ01488.1
Putative acetyltransferase.
  
   
 0.554
AKJ07503.1
Putative polyvinyl-alcohol dehydrogenase.
  
     0.478
AKJ08000.1
Hypothetical protein.
  
     0.428
AKJ01430.1
Phosphoserine phosphatase.
       0.427
AKJ01370.1
Hypothetical protein.
  
     0.417
AKJ01428.1
Long-chain-fatty-acid CoA ligase.
  
    0.414
AKJ01429.1
Transcriptional regulator.
       0.410
AKJ01427.1
Dihydroflavonol-4-reductase.
  
    0.405
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.