STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01445.1ABC transporter, ATP-binding protein. (1151 aa)    
Predicted Functional Partners:
AKJ03919.1
Gliding motility protein GldF.
 
 
 0.870
AKJ02396.1
Gliding motility protein GldF.
 
 
 0.867
AKJ07363.1
Putative membrane spanning protein.
 
 
 0.867
AKJ03918.1
Gliding motility protein GldG.
 
   
 0.784
AKJ01446.1
Hypothetical protein.
       0.773
AKJ01444.1
Cell division inhibitor.
     
 0.740
AKJ01443.1
TsaC protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
       0.539
AKI98409.1
Membrane protein.
  
 
 0.474
AKI99972.1
Membrane protein.
  
 
 0.474
AKJ02488.1
Membrane protein.
  
 
 0.474
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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