STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01447.1Transcriptional regulator, MerR family. (245 aa)    
Predicted Functional Partners:
AKJ02600.1
Cell division protein FtsK.
  
 
 0.555
AKJ01448.1
Hypothetical protein.
       0.510
AKJ01255.1
TolA protein.
  
 
 0.485
AKI98467.1
Glutamine synthetase type II.
  
 
 0.463
AKJ06406.1
Glutamine synthetase family protein.
  
 
 0.463
AKJ07834.1
Glutamine synthetase type I.
  
 
 0.463
AKJ04330.1
Hypothetical protein.
  
 
 0.461
AKJ05961.1
Putative SigmaB asociated two-component system sensor protein.
   
 
 0.461
AKJ04999.1
DnaJ-like protein DjlA.
  
 
 0.453
AKI98514.1
Hypothetical protein.
  
 
 0.452
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.