STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01450.1Hypothetical protein. (439 aa)    
Predicted Functional Partners:
AKJ01449.1
Response regulator.
 
 
   0.948
AKI99931.1
Diguanylate cyclase/phosphodiesterase.
 
 
  
0.924
AKJ05072.1
Serine/threonine protein kinase.
 
  
   0.895
AKI99786.1
Chemotaxis protein methyltransferase CheR.
  
 
 0.867
AKJ03001.1
Response regulator receiver protein.
 
   0.824
AKJ06723.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 
 
 0.800
AKJ06433.1
DNA-binding response regulator.
  
   0.799
AKJ05090.1
Response regulator.
  
   0.793
AKJ03726.1
Hypothetical protein.
 
 
 
 0.788
AKI99816.1
Two-component response regulator.
  
 
   0.786
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.