Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ01459.1Putative integral membrane protein. (710 aa)    
Predicted Functional Partners:
AKJ00155.1
Squalene--hopene cyclase.
  
     0.746
AKJ00771.1
Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2.
   
    0.699
AKJ02199.1
Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
   
    0.699
AKJ00820.1
Transcriptional regulator, TetR family.
  
    0.611
AKJ03564.1
Putative secreted protein.
  
     0.609
hemA
Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
       0.538
AKJ00385.1
NHL repeat domain protein.
  
     0.487
AKJ04633.1
Secreted oxidoreductase.
  
   
 0.466
AKJ00383.1
Transcriptional regulator, TetR family.
  
    0.437
AKJ01921.1
Hypothetical protein.
  
     0.420
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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