STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01488.1Putative acetyltransferase. (268 aa)    
Predicted Functional Partners:
AKJ01489.1
Soluble lytic murein transglycosylase precursor.
       0.773
AKJ01278.1
Ferric siderophore transport system, periplasmic binding protein TonB.
  
     0.694
AKJ07503.1
Putative polyvinyl-alcohol dehydrogenase.
  
     0.589
AKJ08472.1
Putative secreted protein.
  
    0.589
AKJ07391.1
Putative secreted protein.
  
    0.567
AKJ01431.1
Hypothetical protein.
  
   
 0.554
AKJ01243.1
Hypothetical protein.
  
     0.483
AKJ01927.1
CAAX amino terminal protease family protein.
  
     0.480
AKJ02320.1
Hypothetical protein.
  
     0.470
AKJ06316.1
Putative methyltransferase.
  
     0.463
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.