Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ01489.1Soluble lytic murein transglycosylase precursor. (815 aa)    
Predicted Functional Partners:
AKJ01488.1
Putative acetyltransferase.
       0.773
AKJ08337.1
OmpA domain protein.
 
  
 0.537
AKJ02617.1
Sporulation protein.
 
    0.524
AKJ04971.1
Hypothetical protein.
 
    0.507
AKJ01490.1
Hypothetical protein.
       0.432
AKJ01491.1
Hypothetical protein.
       0.432
AKJ07282.1
Stage II sporulation protein D.
 
  
 0.432
AKJ05847.1
tolB protein precursor protein.
  
  
 0.426
AKJ02702.1
OmpA domain protein.
 
  
 0.425
AKJ06607.1
Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP.
 
   
 0.418
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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