Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKJ01501.1Nitric-oxide reductase. (766 aa)    
Predicted Functional Partners:
AKJ00991.1
Nitric-oxide reductase.
  
  
 
0.909
AKJ01500.1
Hypothetical protein.
       0.773
AKJ04774.1
Pectin lyase like protein.
   
  
 0.702
AKJ01636.1
Hypothetical protein.
  
 
 0.648
AKJ01921.1
Hypothetical protein.
  
 
 0.648
AKJ04859.1
Hypothetical protein.
  
 
 0.648
AKJ06752.1
Hypothetical protein.
  
 
 0.648
AKJ01792.1
Type cbb3 cytochrome oxidase biogenesis protein CcoG.
  
  
 0.566
AKJ01499.1
Hypothetical protein.
       0.548
AKI98566.1
Heme biosynthesis protein.
  
  
 0.498
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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