Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01522.1Hypothetical protein. (413 aa)    
Predicted Functional Partners:
AKI99087.1
2OG-Fe(II) oxygenase family enzyme.
  
     0.578
AKJ01523.1
Hypothetical protein.
       0.536
AKJ01524.1
GCN5-related N-acetyltransferase.
       0.536
AKJ07933.1
Hydrolase, alpha/beta hydrolase fold family.
 
     0.474
AKJ01520.1
Heme oxygenase.
       0.440
AKJ01521.1
Hypothetical protein.
       0.440
AKJ05155.1
CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.423
rpoZ
DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
    0.419
AKJ02868.1
HrpA-like helicase.
  
     0.412
AKJ02598.1
Hypothetical protein.
  
  
 0.409
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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