STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01527.1Hypothetical protein. (139 aa)    
Predicted Functional Partners:
AKJ01526.1
Putative integral membrane protein.
       0.611
AKJ01525.1
Hypothetical protein.
       0.561
AKJ04831.1
Uroporphyrinogen-III methyltransferase; Belongs to the precorrin methyltransferase family.
  
  
 0.536
AKJ01528.1
Pseudouridine synthase family protein; Belongs to the pseudouridine synthase RsuA family.
       0.501
AKJ01770.1
Respiratory nitrate reductase gamma chain.
  
  
 0.493
AKI99465.1
Radical SAM, Pyruvate-formate lyase-activating enzyme.
   
  
 0.428
AKI99197.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
 
 0.422
AKJ00821.1
Ferredoxin reductase.
  
 
 0.422
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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