Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ01534.1O-methyltransferase, family 2. (499 aa)    
Predicted Functional Partners:
AKJ01535.1
Aspartate aminotransferase.
 
   
 0.771
AKI99912.1
Myosin heavy chain.
  
     0.729
AKJ07698.1
Hypothetical protein.
  
     0.727
AKJ03917.1
Hypothetical protein.
  
     0.726
AKI99960.1
Putative fatty acid desaturase.
  
     0.723
AKJ01715.1
Type IV fimbrial biogenesis protein PilY1.
  
     0.717
rplK
LSU ribosomal protein L11p; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
    
 
 0.683
AKJ06566.1
MJ0042 family finger-like domain protein.
  
     0.640
AKJ01536.1
Putative fatty acid desaturase.
  
     0.634
AKJ07823.1
Cna B domain protein.
 
     0.624
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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