STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01535.1Aspartate aminotransferase. (388 aa)    
Predicted Functional Partners:
AKJ01534.1
O-methyltransferase, family 2.
 
     0.769
AKJ01715.1
Type IV fimbrial biogenesis protein PilY1.
  
     0.508
AKI99912.1
Myosin heavy chain.
  
    0.505
AKJ05005.1
Aspartokinase.
  
 
 0.487
AKJ01533.1
Dihydrofolate reductase.
       0.482
AKJ07258.1
Glutamate synthase [NADPH] large chain.
     
 0.458
AKJ01532.1
Cysteine desulfurase.
  
 
 0.431
AKJ07698.1
Hypothetical protein.
  
     0.430
AKJ03974.1
Two-component sensor histidine kinase.
  
     0.420
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.