STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01539.1C-methyltransferase. (503 aa)    
Predicted Functional Partners:
AKJ01538.1
Hypothetical protein.
       0.768
AKJ01536.1
Putative fatty acid desaturase.
 
     0.706
AKJ01540.1
Cell division protein FtsX.
 
     0.706
AKJ07698.1
Hypothetical protein.
  
     0.685
AKI99912.1
Myosin heavy chain.
  
     0.677
AKI99960.1
Putative fatty acid desaturase.
  
     0.674
AKJ01715.1
Type IV fimbrial biogenesis protein PilY1.
  
     0.670
AKJ03917.1
Hypothetical protein.
  
     0.656
AKJ01541.1
Hypothetical protein.
 
     0.648
kynA
Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
      
 0.613
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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