Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01541.1Hypothetical protein. (432 aa)    
Predicted Functional Partners:
AKJ05838.1
ABC transporter, ATP-binding protein.
 
 
 0.859
AKJ01540.1
Cell division protein FtsX.
 
    
0.847
AKJ01542.1
Hypothetical protein.
   
 
 0.844
AKJ04514.1
Cell division transporter, ATP-binding protein FtsE.
 
 
 0.842
AKJ00790.1
ABC transporter, ATP-binding protein.
 
 
 0.831
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.829
AKJ05168.1
ABC transporter, ATP-binding protein.
 
 
 0.800
AKJ02447.1
ABC transporter, ATP-binding protein.
 
 
 0.790
AKJ05170.1
ABC transporter, ATP-binding protein.
 
 
 0.789
AKJ05841.1
Hypothetical protein.
 
 
 
 0.785
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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