STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01553.1TldE protein, part of TldE/TldD proteolytic complex. (429 aa)    
Predicted Functional Partners:
AKJ01552.1
TldD protein, part of TldE/TldD proteolytic complex.
 
     0.887
AKJ05475.1
TldD protein, part of TldE/TldD proteolytic complex.
  
     0.768
AKJ05474.1
TldE protein, part of TldE/TldD proteolytic complex.
  
     0.767
AKJ05429.1
TldD-domain protein.
  
     0.630
AKI99912.1
Myosin heavy chain.
  
     0.495
AKJ04166.1
Hypothetical protein.
  
     0.490
AKJ07823.1
Cna B domain protein.
  
     0.469
AKJ01715.1
Type IV fimbrial biogenesis protein PilY1.
  
     0.462
AKJ01536.1
Putative fatty acid desaturase.
  
     0.448
AKJ02040.1
Putative lipoprotein.
  
     0.409
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.