STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01566.1Beta-lactamase class C and other penicillin binding protein. (391 aa)    
Predicted Functional Partners:
AKJ04562.1
Hypothetical protein.
  
 0.980
AKJ00615.1
Beta-hexosaminidase.
  
 0.961
AKJ07666.1
Beta-hexosaminidase.
  
 0.954
AKJ00629.1
D-alanyl-D-alanine carboxypeptidase.
  
  
 0.927
AKJ01565.1
Muramoyltetrapeptide carboxypeptidase.
 
     0.918
AKJ04258.1
D-alanyl-D-alanine carboxypeptidase.
  
  
 0.917
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling.
  
 0.859
AKJ01567.1
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase.
 
   
 0.848
AKJ01568.1
Thioredoxin family protein.
       0.773
AKI99884.1
Beta-lactamase.
  
     0.741
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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