STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01568.1Thioredoxin family protein. (183 aa)    
Predicted Functional Partners:
AKJ01485.1
Alkyl hydroperoxide reductase protein C.
  
 0.825
AKJ01567.1
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase.
     
 0.793
AKJ05931.1
Cytochrome c-type biogenesis protein ResA.
 
   
 0.785
AKJ01565.1
Muramoyltetrapeptide carboxypeptidase.
       0.778
AKJ01566.1
Beta-lactamase class C and other penicillin binding protein.
       0.773
AKJ01569.1
Inositol-1-monophosphatase.
   
   0.737
AKJ03208.1
Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone.
 
 
 0.675
AKI99376.1
Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase.
  
 
 0.616
AKJ03018.1
Cytochrome c heme lyase subunit CcmF.
 
  
 0.611
AKJ02211.1
Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase.
  
 
 0.590
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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