Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ01574.1Putative abductin-like protein. (441 aa)    
Predicted Functional Partners:
AKJ01577.1
TPR domain protein, putative component of TonB system.
 
     0.907
AKJ05036.1
Adventurous gliding motility protein S.
 
 
 0.878
AKJ05037.1
TolR-like protein.
 
 
 0.876
AKJ07962.1
Adventurous gliding motility protein S.
 
 
 0.875
AKJ05038.1
Ferric siderophore transport system, biopolymer transport protein ExbB.
 
 
 0.816
AKJ07964.1
Ferric siderophore transport system, biopolymer transport protein ExbB.
 
 
 0.794
AKJ08151.1
TonB family protein.
 
 
 0.777
AKJ04299.1
TPR domain protein, putative component of TonB system.
  
 
   0.771
AKJ06332.1
TonB family protein.
 
 
 0.767
AKJ02404.1
TPR domain protein, putative component of TonB system.
 
     0.756
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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