Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01583.1Gliding motility protein MglA. (159 aa)    
Predicted Functional Partners:
AKJ01582.1
Gliding motility protein MglA.
 
 
 0.994
AKJ03239.1
Gliding motility protein MglA.
 
 
 0.979
AKJ08267.1
Gliding motility protein MglA.
 
 
 0.979
AKJ07805.1
Gliding motility protein MglA.
 
 
 0.963
AKJ05350.1
Gliding motility protein MglA.
 
 
 0.949
AKJ06647.1
Hypothetical protein.
  
   
 0.795
AKJ06613.1
Hypothetical protein.
  
   
 0.781
AKJ08456.1
Hypothetical protein.
  
 
 0.776
AKJ04329.1
Hypothetical protein.
  
     0.774
AKJ02279.1
Hypothetical protein.
  
     0.771
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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