STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01596.1Dolichol-phosphate mannosyltransferase. (236 aa)    
Predicted Functional Partners:
AKJ06349.1
Polymyxin resistance protein ArnT.
 
  
 0.845
AKJ01597.1
Polysaccharide deacetylase domain protein.
 
  
 0.833
AKJ01878.1
Polymyxin resistance protein ArnC.
 
     0.734
AKJ01595.1
Amine oxidase, putative.
 
   
 0.683
AKJ05132.1
Capsular polysaccharide biosynthesis protein.
 
  
 0.654
AKJ01264.1
Hypothetical protein.
 
  
 0.601
AKJ00258.1
CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.597
AKJ04654.1
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.526
AKJ00513.1
UDP-glucose 6-dehydrogenase.
 
  
 0.524
AKI98993.1
Putative DNA-binding regulatory protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.520
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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