STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01603.1TolA protein. (1150 aa)    
Predicted Functional Partners:
AKJ02600.1
Cell division protein FtsK.
 
 0.827
AKJ00687.1
Cell division protein FtsK.
  
 
  0.794
AKI99964.1
HEAT repeat protein.
  
 
   0.777
AKJ01931.1
TPR domain protein, putative component of TonB system.
 
     0.777
AKJ07382.1
Exonuclease SbcC.
 
     0.777
AKJ01604.1
Hypothetical protein.
       0.773
AKJ03134.1
Tetratricopeptide repeat protein.
 
   0.772
AKJ02410.1
TPR domain protein, putative component of TonB system.
  
     0.762
AKJ00731.1
FrgA.
  
     0.761
AKJ01243.1
Hypothetical protein.
  
 
   0.760
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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