Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ01623.1Two-component response regulator. (125 aa)    
Predicted Functional Partners:
AKJ01622.1
Circadian input kinase A.
 
 
 0.959
AKJ01624.1
GGDEF domain protein.
 
 
 0.951
AKJ01621.1
Hypothetical protein.
 
   0.906
AKJ07725.1
Diguanylate cyclase/phosphodiesterase.
 
 
 0.847
AKI99983.1
Sensory box histidine kinase.
 
 
 0.814
AKJ03209.1
Multi-sensor signal transduction histidine kinase.
 
 
 0.813
AKJ06718.1
Sensory box histidine kinase.
 
 
 0.809
AKJ08223.1
Diguanylate cyclase/phosphodiesterase.
 
 
 0.806
AKJ08284.1
Sensory box histidine kinase.
 
 
 0.806
AKJ07310.1
Periplasmic sensor signal transduction histidine kinase.
 
 
 0.799
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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