STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01641.13-oxoadipate CoA-transferase subunit A. (266 aa)    
Predicted Functional Partners:
AKJ01642.1
3-oxoadipate CoA-transferase subunit B.
 
 0.999
AKJ03864.1
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B.
  
 
 0.932
AKI99027.1
Aspartyl-tRNA(Asn) amidotransferase subunit A.
     
  0.900
AKJ04686.1
Amidase; Belongs to the amidase family.
     
  0.900
AKJ06764.1
N-carbamoylputrescine amidase.
     
  0.900
AKJ08410.1
Amidase.
     
  0.900
AKJ01640.1
Transcriptional regulator, TetR family.
 
     0.829
AKJ02857.1
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family.
  
 
 0.796
AKJ01643.1
Alcohol dehydrogenase.
     
 0.722
AKJ01644.1
Hydroxymethylglutaryl-CoA synthase.
     
 0.608
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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