STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01646.1Acyl dehydratase. (308 aa)    
Predicted Functional Partners:
AKJ04622.1
Transcriptional regulator, TetR family.
  
     0.625
AKJ03488.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.576
AKJ01874.1
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.575
AKI99035.1
Hypothetical protein.
   
 0.574
AKJ06596.1
Catalase; Belongs to the catalase family.
   
 0.574
AKJ04211.1
Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
   
 0.562
AKJ01873.1
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.547
AKJ04212.1
Putative acyl-coa dehydrogenase fade36.
 
 
 0.538
AKJ04210.1
Isovaleryl-CoA dehydrogenase.
 
 0.536
AKJ01645.1
Methionine ABC transporter ATP-binding protein.
       0.528
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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