STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01654.1Hypothetical protein. (75 aa)    
Predicted Functional Partners:
AKJ01655.1
Putative gas vesicle synthesis protein.
 
   
 0.956
AKJ01652.1
Gas vesicle synthesis GvpLGvpF.
 
   
 0.955
AKJ01656.1
Gas vesicle synthesis protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.
 
   
 0.953
gvpA
Gas vesicle structural protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.
 
   
 0.929
AKJ01649.1
Gas vesicle synthesis protein.
 
   
 0.887
AKJ01650.1
Gas vesicle synthesis protein.
 
     0.876
AKJ01653.1
Putative gas vesicle protein GvpG.
       0.801
AKJ04356.1
Arsenical pump-driving ATPase.
 
     0.636
AKJ00507.1
Hypothetical protein.
  
     0.457
AKJ05593.1
Hypothetical protein.
  
     0.434
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.