STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01658.1Putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 30 family. (599 aa)    
Predicted Functional Partners:
AKJ00325.1
Alkaline ceramidase.
  
  
  0.925
AKI99944.1
Alkaline ceramidase.
  
  
  0.924
AKJ00391.1
Dihydrosphingosine delta-4 desaturase.
  
  
  0.911
AKJ00685.1
Hypothetical protein.
     
  0.900
AKJ02458.1
Glycosyltransferase.
     
  0.900
AKJ05472.1
Alkaline ceramidase.
     
  0.900
AKJ06049.1
Dihydrosphingosine delta-4 desaturase.
     
  0.900
AKJ02103.1
Endo-1,4-beta-xylanase A precursor.
   
 0.739
AKI98426.1
Glycoside hydrolase, family 16 precursor.
 
   
 0.732
AKJ01113.1
Endo-1,4-beta-xylanase A precursor.
 
   
 0.710
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (10%) [HD]