STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01663.1UDP-glucose 4-epimerase. (323 aa)    
Predicted Functional Partners:
AKJ00513.1
UDP-glucose 6-dehydrogenase.
 
 0.953
AKJ01665.1
Hypothetical protein.
 
    0.945
AKJ03157.1
UDP-glucose 4-epimerase.
  
  
 
0.928
AKJ03347.1
UDP-galactopyranose mutase.
  
 
 0.925
AKJ01601.1
UDP-glucose 4-epimerase.
  
  
 
0.913
AKJ03344.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 0.912
AKJ03377.1
UDP-glucose 4-epimerase.
     
  0.900
AKJ01600.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
 
    0.747
AKJ03156.1
Acyltransferase family protein.
 
    0.709
rpsS
SSU ribosomal protein S19p; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.586
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.