STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01668.1Ethanolamine ammonia-lyase heavy chain. (773 aa)    
Predicted Functional Partners:
AKJ07439.1
Ethanolamine ammonia-lyase heavy chain.
 
0.999
AKI99498.1
Glycerophosphoryl diester phosphodiesterase.
     
  0.900
AKJ01989.1
Glycerophosphoryl diester phosphodiesterase.
     
  0.900
AKJ05562.1
Glycerophosphoryl diester phosphodiesterase.
     
  0.900
AKJ06691.1
Glycerophosphoryl diester phosphodiesterase.
     
  0.900
AKI99246.1
Tetratricopeptide repeat protein.
  
     0.570
AKJ01518.1
Phage lysin, 1,4-beta-N-acetylmuramidase.
  
     0.534
AKJ01671.1
Hypothetical protein.
     
 0.533
AKJ03788.1
Acetyltransferase, GNAT family.
  
     0.524
AKJ01669.1
ADP-ribose pyrophosphatase.
  
    0.504
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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