STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01689.1Lipid A export ATP-binding/permease protein MsbA. (747 aa)    
Predicted Functional Partners:
AKJ01690.1
Hypothetical protein.
 
 
 0.933
AKJ01691.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.856
AKJ01693.1
Lanthionine biosynthesis protein LanM.
 
   
 0.824
AKJ01688.1
Metallo-beta-lactamase family protein.
       0.651
AKJ07928.1
Membrane fusion component of tripartite multidrug resistance system.
  
 
 0.647
AKJ03527.1
Putative RND efflux membrane fusion protein.
 
 
 0.640
AKJ04881.1
Lanthionine biosynthesis protein LanM.
 
   
 0.561
AKJ05795.1
Lanthionine biosynthesis protein LanM.
 
   
 0.554
AKJ02601.1
Lipid A export ATP-binding/permease protein MsbA.
 
 
  
0.525
AKJ00046.1
Lipid A export ATP-binding/permease protein MsbA.
 
 
  
0.508
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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