STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01693.1Lanthionine biosynthesis protein LanM. (1035 aa)    
Predicted Functional Partners:
AKJ01689.1
Lipid A export ATP-binding/permease protein MsbA.
 
   
 0.824
AKJ01691.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.628
AKJ01690.1
Hypothetical protein.
       0.603
AKJ06183.1
TPR repeat protein.
  
     0.580
AKI99512.1
Argininosuccinate lyase.
  
     0.574
AKJ01692.1
Hypothetical protein.
       0.572
AKJ03528.1
Lipid A export ATP-binding/permease protein MsbA.
 
   
 0.571
AKJ04874.1
Lipid A export ATP-binding/permease protein MsbA.
 
   
 0.554
AKI99514.1
Argininosuccinate lyase.
  
     0.551
AKJ01688.1
Metallo-beta-lactamase family protein.
       0.514
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.