Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
AKJ01693.1Lanthionine biosynthesis protein LanM. (1035 aa)    
Predicted Functional Partners:
AKJ01689.1
Lipid A export ATP-binding/permease protein MsbA.
 
   
 0.812
AKJ01691.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.628
AKJ01690.1
Hypothetical protein.
       0.603
AKJ06183.1
TPR repeat protein.
  
     0.580
AKI99512.1
Argininosuccinate lyase.
  
     0.574
AKJ01692.1
Hypothetical protein.
       0.572
AKI99514.1
Argininosuccinate lyase.
  
     0.551
AKJ03528.1
Lipid A export ATP-binding/permease protein MsbA.
 
   
 0.546
AKJ04874.1
Lipid A export ATP-binding/permease protein MsbA.
 
   
 0.528
AKJ01688.1
Metallo-beta-lactamase family protein.
       0.514
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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