Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ01368.1 | AKJ01704.1 | AA314_02994 | AA314_03330 | Sulfur carrier protein adenylyltransferase ThiF. | CsdL. | 0.465 |
AKJ01368.1 | AKJ05568.1 | AA314_02994 | AA314_07194 | Sulfur carrier protein adenylyltransferase ThiF. | Sulfur carrier protein adenylyltransferase ThiF. | 0.931 |
AKJ01368.1 | thiG | AA314_02994 | AA314_04669 | Sulfur carrier protein adenylyltransferase ThiF. | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.881 |
AKJ01704.1 | AKJ01368.1 | AA314_03330 | AA314_02994 | CsdL. | Sulfur carrier protein adenylyltransferase ThiF. | 0.465 |
AKJ01704.1 | AKJ01705.1 | AA314_03330 | AA314_03331 | CsdL. | Putative deoxyribonuclease YcfH. | 0.757 |
AKJ01704.1 | AKJ01707.1 | AA314_03330 | AA314_03333 | CsdL. | Putative lipoprotein. | 0.496 |
AKJ01704.1 | AKJ05568.1 | AA314_03330 | AA314_07194 | CsdL. | Sulfur carrier protein adenylyltransferase ThiF. | 0.491 |
AKJ01704.1 | AKJ07702.1 | AA314_03330 | AA314_09328 | CsdL. | Methanol oxidation genes, glmU-like protein. | 0.495 |
AKJ01704.1 | AKJ08329.1 | AA314_03330 | AA314_09955 | CsdL. | Bis(5'-nucleosyl)-tetraphosphatase, symmetrical. | 0.774 |
AKJ01704.1 | rtcA | AA314_03330 | AA314_03872 | CsdL. | RNA 3'-terminal phosphate cyclase; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing. | 0.452 |
AKJ01704.1 | rtcA-2 | AA314_03330 | AA314_05638 | CsdL. | RNA 3'-terminal phosphate cyclase; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing. | 0.452 |
AKJ01704.1 | thiG | AA314_03330 | AA314_04669 | CsdL. | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.630 |
AKJ01704.1 | tpiA | AA314_03330 | AA314_06826 | CsdL. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.688 |
AKJ01705.1 | AKJ01704.1 | AA314_03331 | AA314_03330 | Putative deoxyribonuclease YcfH. | CsdL. | 0.757 |
AKJ01705.1 | AKJ01707.1 | AA314_03331 | AA314_03333 | Putative deoxyribonuclease YcfH. | Putative lipoprotein. | 0.545 |
AKJ01707.1 | AKJ01704.1 | AA314_03333 | AA314_03330 | Putative lipoprotein. | CsdL. | 0.496 |
AKJ01707.1 | AKJ01705.1 | AA314_03333 | AA314_03331 | Putative lipoprotein. | Putative deoxyribonuclease YcfH. | 0.545 |
AKJ05568.1 | AKJ01368.1 | AA314_07194 | AA314_02994 | Sulfur carrier protein adenylyltransferase ThiF. | Sulfur carrier protein adenylyltransferase ThiF. | 0.931 |
AKJ05568.1 | AKJ01704.1 | AA314_07194 | AA314_03330 | Sulfur carrier protein adenylyltransferase ThiF. | CsdL. | 0.491 |
AKJ05568.1 | thiG | AA314_07194 | AA314_04669 | Sulfur carrier protein adenylyltransferase ThiF. | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.945 |
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