STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01728.1FHA domain protein. (316 aa)    
Predicted Functional Partners:
selD
Selenide,water dikinase; Synthesizes selenophosphate from selenide and ATP.
       0.773
AKJ01730.1
N-acetylmuramoyl-L-alanine amidase.
       0.612
AKJ05773.1
Adenylate cyclase.
 
 
   0.567
AKJ05772.1
Adenylate cyclase.
 
 
   0.559
AKJ04721.1
Hypothetical protein.
  
     0.557
AKJ05771.1
Adenylate cyclase.
 
 
   0.548
bamD
Competence protein ComL precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
       0.535
AKJ02913.1
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
 
 
 
 0.530
AKI99553.1
Hypothetical protein.
  
     0.522
AKJ01727.1
Hypothetical protein.
       0.522
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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