Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
selDSelenide,water dikinase; Synthesizes selenophosphate from selenide and ATP. (384 aa)    
Predicted Functional Partners:
selA
L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
 
  
 0.985
AKJ01626.1
Thioredoxin reductase.
     
 0.912
AKJ03601.1
Thioredoxin reductase.
     
 0.912
AKJ00770.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
 0.909
AKJ04786.1
Cysteine desulfurase.
    
 0.909
AKJ01532.1
Cysteine desulfurase.
  
 
 0.876
AKJ00634.1
Selenocysteine-specific translation elongation factor.
 
   
 0.863
AKJ01728.1
FHA domain protein.
       0.773
AKJ05058.1
Cysteine desulfurase.
  
 
 0.762
AKI98616.1
Formate dehydrogenase O alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   
 0.738
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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