STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01756.1Cholesterol oxidase. (190 aa)    
Predicted Functional Partners:
AKJ01755.1
Cholesterol oxidase.
     0.959
AKJ01754.1
Cholesterol oxidase.
 
   
 0.922
AKJ03969.1
Cholesterol oxidase precursor protein.
 
     0.908
AKJ03970.1
Cholesterol oxidase.
 
   
 0.785
AKJ08123.1
Hypothetical protein.
 
     0.515
AKJ08234.1
Hypothetical protein.
 
     0.509
AKJ01757.1
Dihydroflavonol-4-reductase.
       0.480
AKJ01752.1
Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.433
AKJ03968.1
Cholesterol oxidase.
 
    
0.423
AKJ01753.1
Hypothetical protein.
       0.417
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.