Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01777.1Sterol desaturase. (366 aa)    
Predicted Functional Partners:
AKJ01778.1
Hypothetical protein.
       0.592
AKJ06224.1
Putative inner membrane protein.
 
     0.585
AKJ05968.1
Sterol desaturase family protein.
  
     0.574
AKJ00266.1
Hydroxymethylglutaryl-CoA synthase.
   
  
 0.465
AKJ01644.1
Hydroxymethylglutaryl-CoA synthase.
   
  
 0.465
AKJ06614.1
Hypothetical protein.
  
     0.454
AKI98476.1
Ketosteroid isomerase-related protein.
  
     0.450
AKI99895.1
Nuclease protein.
   
    0.448
AKJ00774.1
Hypothetical protein.
  
     0.446
AKJ00951.1
Ser/Thr and Tyr protein phosphatase.
  
 
 0.433
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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