Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01787.1Type cbb3 cytochrome oxidase biogenesis protein CcoI. (762 aa)    
Predicted Functional Partners:
AKJ01789.1
Cytochrome c oxidase subunit CcoN; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.963
AKJ01792.1
Type cbb3 cytochrome oxidase biogenesis protein CcoG.
 
  
 0.947
AKJ01791.1
Cytochrome c oxidase subunit CcoP.
 
   
 0.944
AKJ01785.1
Heavy-metal-associated domain protein.
 
   
 0.906
AKJ01788.1
Putative cytochrome oxidase maturation protein, cbb3-type.
       0.794
AKJ01790.1
Cytochrome c oxidase, cbb3-type, CcoQ subunit.
       0.718
AKI99188.1
Acetyltransferase, GNAT family.
 
     0.623
AKJ01807.1
Coproporphyrinogen III oxidase, oxygen-independent; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.611
AKJ01786.1
Hypothetical protein.
       0.570
AKJ02524.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.475
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (20%) [HD]