STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01808.1Hypothetical protein. (195 aa)    
Predicted Functional Partners:
AKJ01807.1
Coproporphyrinogen III oxidase, oxygen-independent; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
       0.773
AKJ01809.1
Two-component hybrid sensor and regulator.
       0.737
AKJ01715.1
Type IV fimbrial biogenesis protein PilY1.
  
     0.696
AKJ07823.1
Cna B domain protein.
  
     0.637
AKJ01534.1
O-methyltransferase, family 2.
  
     0.619
AKJ01770.1
Respiratory nitrate reductase gamma chain.
 
     0.601
AKI99912.1
Myosin heavy chain.
  
     0.571
AKJ00745.1
Type IV fimbrial biogenesis protein PilY1.
  
     0.552
AKJ07742.1
Type IV fimbrial biogenesis protein PilY1.
  
     0.532
AKJ00611.1
Type IV fimbrial biogenesis protein PilY1.
  
     0.531
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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