STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01809.1Two-component hybrid sensor and regulator. (120 aa)    
Predicted Functional Partners:
AKJ01807.1
Coproporphyrinogen III oxidase, oxygen-independent; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
       0.737
AKJ01808.1
Hypothetical protein.
       0.737
AKJ05823.1
Flagellar motor switch protein FliM.
  
  
 0.723
AKI99786.1
Chemotaxis protein methyltransferase CheR.
  
 
 0.523
AKI99219.1
Sensor histidine kinase/response regulator.
 
 
 0.494
AKJ08295.1
Diguanylate cyclase/phosphodiesterase.
 
 
 0.468
AKJ04331.1
Flagellar synthesis regulator FleN.
  
 
 0.447
AKJ02009.1
Signal transduction histidine kinase CheA.
  
 
 0.441
AKJ05979.1
Signal transduction histidine kinase CheA.
  
 
 0.441
AKJ07081.1
Signal transduction histidine kinase CheA.
  
 
 0.441
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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