STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01840.1Sensor histidine kinase. (545 aa)    
Predicted Functional Partners:
AKJ00612.1
Diguanylate cyclase/phosphodiesterase.
 
 
 
 0.822
AKJ01839.1
Response regulator of zinc sigma-54-dependent two-component system.
 
 
   0.818
AKJ02855.1
Adenylate cyclase.
 
 
 
 0.794
AKJ08284.1
Sensory box histidine kinase.
 
 
 
 0.790
AKJ08286.1
Histidine protein kinase AsgD.
  
 
 
 0.790
AKI99081.1
Chemotaxis protein methyltransferase CheR.
 
 
 
 0.788
AKI99519.1
Sensory box histidine kinase.
 
 
 
 0.788
AKJ01383.1
Chemotaxis protein methyltransferase CheR.
  
 
 
 0.784
AKI99082.1
Chemotaxis protein methyltransferase CheR.
 
 
 
 0.782
AKJ08110.1
Histidine protein kinase AsgD.
 
 
 
 0.782
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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