STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01840.1Sensor histidine kinase. (545 aa)    
Predicted Functional Partners:
AKJ00612.1
Diguanylate cyclase/phosphodiesterase.
 
 
 
 0.828
AKJ01839.1
Response regulator of zinc sigma-54-dependent two-component system.
 
   0.824
AKI99081.1
Chemotaxis protein methyltransferase CheR.
 
 
 
 0.810
AKI99082.1
Chemotaxis protein methyltransferase CheR.
 
 
 
 0.805
AKJ05090.1
Response regulator.
  
 
   0.800
AKJ08451.1
DNA-binding response regulator KdpE.
  
 
   0.797
AKJ02855.1
Adenylate cyclase.
 
 
 0.796
AKJ02691.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
 
   0.793
AKJ08286.1
Histidine protein kinase AsgD.
  
 
 
 0.792
AKJ08284.1
Sensory box histidine kinase.
 
 
 
 0.790
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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