STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01846.1Serine/threonine kinase PKN8. (994 aa)    
Predicted Functional Partners:
AKJ01847.1
Putative DNA-binding regulatory protein.
   
 
 0.797
AKJ03655.1
Hypothetical protein.
  
     0.774
AKJ05609.1
Serine/threonine protein kinase.
  
     0.773
AKJ00968.1
Serine/threonine protein kinase.
  
     0.768
AKJ01845.1
Serine/threonine protein kinase.
  
     0.739
AKJ02913.1
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
 
 
 0.729
AKJ01181.1
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
 
   0.675
AKI99585.1
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
 
   0.657
AKJ06283.1
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
 
   0.640
AKJ05907.1
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
 
   0.632
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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