STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01852.1Hypothetical protein. (439 aa)    
Predicted Functional Partners:
AKJ01850.1
Beta-glucosidase.
   
 0.896
AKJ01851.1
Beta-glucosidase.
 
   
 0.773
AKJ01658.1
Putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 30 family.
 
  
 0.647
AKJ05398.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
   
  
 0.569
AKJ01853.1
Hypothetical protein.
       0.515
AKJ01113.1
Endo-1,4-beta-xylanase A precursor.
     0.503
AKJ02103.1
Endo-1,4-beta-xylanase A precursor.
     0.492
AKJ07515.1
Microbial collagenase, secreted.
  
     0.490
AKJ00154.1
Hypothetical protein.
 
     0.477
AKJ04091.1
Protein ImpG/VasA.
  
     0.474
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.