STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01860.1Hypothetical protein. (403 aa)    
Predicted Functional Partners:
AKJ03190.1
DNA gyrase subunit A.
  
     0.725
AKJ05944.1
Hypothetical protein.
  
     0.715
AKI99239.1
Lipase.
  
     0.686
AKJ01715.1
Type IV fimbrial biogenesis protein PilY1.
  
     0.671
AKI98628.1
Lactonizing lipase precursor.
  
     0.654
AKJ07333.1
Trypsin domain protein; Belongs to the peptidase S1B family.
  
     0.610
AKJ07506.1
SusC, outer membrane protein.
  
     0.594
AKJ07823.1
Cna B domain protein.
  
   
 0.586
AKJ00555.1
Transposase.
  
     0.568
AKI98431.1
Transposase.
  
     0.564
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.