Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ00525.1 | AKJ01861.1 | AA314_02151 | AA314_03487 | Lipid A biosynthesis lauroyl acyltransferase. | Permease of the drug/metabolite transporter. | 0.424 |
AKJ01861.1 | AKJ00525.1 | AA314_03487 | AA314_02151 | Permease of the drug/metabolite transporter. | Lipid A biosynthesis lauroyl acyltransferase. | 0.424 |
AKJ01861.1 | AKJ01862.1 | AA314_03487 | AA314_03488 | Permease of the drug/metabolite transporter. | Putative membrane protein. | 0.768 |
AKJ01861.1 | AKJ01863.1 | AA314_03487 | AA314_03489 | Permease of the drug/metabolite transporter. | BNR repeat domain protein. | 0.428 |
AKJ01861.1 | AKJ04734.1 | AA314_03487 | AA314_06360 | Permease of the drug/metabolite transporter. | Putative ATPase. | 0.459 |
AKJ01862.1 | AKJ01861.1 | AA314_03488 | AA314_03487 | Putative membrane protein. | Permease of the drug/metabolite transporter. | 0.768 |
AKJ01862.1 | AKJ01863.1 | AA314_03488 | AA314_03489 | Putative membrane protein. | BNR repeat domain protein. | 0.431 |
AKJ01863.1 | AKJ01861.1 | AA314_03489 | AA314_03487 | BNR repeat domain protein. | Permease of the drug/metabolite transporter. | 0.428 |
AKJ01863.1 | AKJ01862.1 | AA314_03489 | AA314_03488 | BNR repeat domain protein. | Putative membrane protein. | 0.431 |
AKJ04734.1 | AKJ01861.1 | AA314_06360 | AA314_03487 | Putative ATPase. | Permease of the drug/metabolite transporter. | 0.459 |